Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGAACGAGGGTAGCAGCTGCAT
.(((((((((..((((..(((&)))....)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152699
GeneSymbolSENP5
Binding site134,160
Score0.923
Seed1
Au0.456
Energy-20.6
Binding len26
Me-9.965
Phylopstem1.0309957777777778
Phylopflank1.8140008862499997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure