Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTGACTTGTATGCCAT
...((((((((((.((.((((.&)))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152703
GeneSymbolSAMD9L
Binding site1712,1730
Score0.808
Seed0
Au0.603
Energy-16.2
Binding len18
Me-7.371
Phylopstem0.37885940000000007
Phylopflank1.05387181875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure