Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGGGCTGCAGCTGGGAT
((.(((((((((((...((((&))))....))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152703
GeneSymbolSAMD9L
Binding site1139,1162
Score1.0
Seed0
Au0.368
Energy-25.7
Binding len23
Me-6.464
Phylopstem-0.30711445454545455
Phylopflank1.2464512799999998
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end5
Position5UTR
2D Structure