Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTATTCAGCACCAATTGTGTGCCAGA
..((((((((((((........&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152707
GeneSymbolSLC25A16
Binding site5088,5116
Score1.0
Seed1
Au0.529
Energy-19.7
Binding len14
Me-5.925
Phylopstem1.0036437583333333
Phylopflank0.7263291112499997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure