Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCGGGAAGATGAGATTGGAGGATCACTTGGGCCTGGGAGGTTGAGGCTACAGTGA
(((((((((((((((((((((.&))))))))))))....................))))).................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152713
GeneSymbolSTT3A
Binding site3331,3390
Score0.923
Seed1
Au0.456
Energy-21.6
Binding len59
Me-3.938
Phylopstem-0.017759868965517237
Phylopflank-0.06516076500000001
Longest consecutive pairings12
Position of longest consecutive pairings47
Pairings in 3prime end7
Position3UTR
2D Structure