Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACTGTCAGCTGCT
..((((((((((((.......&))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152716
GeneSymbolPATL1
Binding site1466,1480
Score0.923
Seed1
Au0.603
Energy-18.7
Binding len14
Me-5.925
Phylopstem0.8789554692307692
Phylopflank1.0169351187500002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure