Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGGGAGGAGCCTGCTTCATCATCTCCGGATCCCTCTCAGTGG
((((((((((((((((((....&))))))))))))))..........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152717
GeneSymbolMS4A15
Binding site264,309
Score0.923
Seed1
Au0.412
Energy-22.6
Binding len45
Me-3.938
Phylopstem2.5776282795454546
Phylopflank1.7079151009999998
Longest consecutive pairings14
Position of longest consecutive pairings31
Pairings in 3prime end4
PositionCDS
2D Structure