Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCAACTGTAGCTC
....(((((((((((..(((.&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152718
GeneSymbolVWCE
Binding site2607,2624
Score1.0
Seed0
Au0.368
Energy-21.7
Binding len17
Me-9.78
Phylopstem2.62447309090909
Phylopflank2.36008038975
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure