Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGAAAGAACCATTTGGGAGAGCCCATGGTGA
(((((((((((((((((((((.&))))))))))))............)))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152720
GeneSymbolNEK3
Binding site241,278
Score1.0
Seed1
Au0.397
Energy-28.9
Binding len37
Me-3.938
Phylopstem0.12767204444444447
Phylopflank0.019685302499999974
Longest consecutive pairings12
Position of longest consecutive pairings25
Pairings in 3prime end7
Position5UTR
2D Structure