Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGGAGCCCAGCTGTG
..(((((((.((((.((....&)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152720
GeneSymbolNEK3
Binding site287,302
Score1.0
Seed1
Au0.397
Energy-18.4
Binding len15
Me-6.935
Phylopstem0.3939514285714286
Phylopflank0.12532468750000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure