Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGCAAATGACATCGTAGCTGCAT
.((((((((((((((((.(((&))).))))......)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152721
GeneSymbolDOK6
Binding site1816,1843
Score0.923
Seed1
Au0.662
Energy-22.6
Binding len27
Me-3.793
Phylopstem0.2700418635454545
Phylopflank0.3770874674375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure