Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTACAGCTGCATGGTGGAGAACCCCATCAGCCAGGGCCGCAGCCTGCC
..((((((((((((.(..(((&.)))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152722
GeneSymbolHEPACAM
Binding site678,730
Score0.923
Seed1
Au0.426
Energy-23.2
Binding len20
Me-5.692
Phylopstem0.6662514615384615
Phylopflank0.33018536125
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure