Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCACCCACACCAAGGAGACAGAACAGCTGCGCAGCCAGCTGCAGA
((((((((..((((((..(((&.)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152723
GeneSymbolCCDC89
Binding site719,768
Score0.923
Seed1
Au0.382
Energy-22.7
Binding len21
Me-6.236
Phylopstem0.20467137499999996
Phylopflank-0.149375003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure