Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCCAGGAGCTGCAGG
((((((((.(((((...((((&)))).)))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152723
GeneSymbolCCDC89
Binding site831,852
Score0.974
Seed1
Au0.397
Energy-22.1
Binding len21
Me-5.962
Phylopstem0.47187549999999995
Phylopflank0.09110918800000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure