Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCGTCGCAGCATGCGC
.((((((((((..(((..(((&)))..))).)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152724
GeneSymbolRSU1
Binding site3153,3174
Score0.846
Seed1
Au0.456
Energy-20.4
Binding len21
Me-8.429
Phylopstem5.757212727272727
Phylopflank6.23649627875
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure