Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCCGCCTGCGAC
((((((..((((((...(((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152729
GeneSymbolNT5DC1
Binding site95,111
Score0.846
Seed0
Au0.353
Energy-17.3
Binding len16
Me-8.763
Phylopstem1.7577974999999997
Phylopflank1.43343045485375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure