Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACAGCCGCGCTGCC
..(((((.((((((((.(((.&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152733
GeneSymbolBTBD9
Binding site4315,4333
Score0.846
Seed0
Au0.368
Energy-26.9
Binding len18
Me-7.271
Phylopstem-0.6195850125
Phylopflank-0.67078387125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure