Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAAGGATTCAGCCTGGCCACTTGGCTAGGACTCTGCCAGC
..(((((((((((((((((...&))))))))))))............................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152734
GeneSymbolC6orf89
Binding site1335,1381
Score0.923
Seed1
Au0.397
Energy-23.4
Binding len46
Me-4.957
Phylopstem0.03758580888888889
Phylopflank-0.06533832749999999
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end5
Position3UTR
2D Structure