Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCCGCGGCAGGCGAA
((((.(((((((((.......&)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348762
GeneSymbolC2orf42
Binding site21,37
Score0.846
Seed0
Au0.394
Energy-20.4
Binding len16
Me-9.025
Phylopstem2.813842666666667
Phylopflank1.0114707463636365
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end1
Position5UTR
2D Structure