Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAAAAGCCTGTGGTTGCT
..((((((((((((...((((&)))).....)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348762
GeneSymbolC2orf42
Binding site1338,1361
Score0.846
Seed1
Au0.529
Energy-19.5
Binding len23
Me-5.925
Phylopstem2.0181183230769233
Phylopflank2.230305615
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure