Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTGCCAGTATAGTGGCTGCT
..(((((((((((((((((((&)))))..................))))))))..............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152736
GeneSymbolZSCAN26
Binding site1894,1962
Score0.846
Seed1
Au0.574
Energy-18.3
Binding len68
Me-4.957
Phylopstem0.05337963731343278
Phylopflank0.35577666249999995
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end8
Position3UTR
2D Structure