Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCGGCTGCGGCCGGCAGC
((((.(((((((((((..(((&))).)))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152740
GeneSymbolHIBADH
Binding site147,169
Score0.846
Seed0
Au0.294
Energy-25.0
Binding len22
Me-8.057
Phylopstem1.9944895454545455
Phylopflank1.1651843212499997
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure