Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGGAGCTGCAGCCGCT
..((.(((((((((...((((&)))).....))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152743
GeneSymbolBRAT1
Binding site1165,1187
Score0.846
Seed0
Au0.25
Energy-21.8
Binding len22
Me-10.045
Phylopstem2.7603081111111107
Phylopflank2.0259543757500005
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure