Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCGCTGCAGCTGCAC
.(((((((((((.(((..(((&))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152744
GeneSymbolSDK1
Binding site592,611
Score0.923
Seed1
Au0.279
Energy-24.4
Binding len19
Me-5.082
Phylopstem1.0522275454545456
Phylopflank2.02810494625
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure