Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTATTAATAAGGGTTGGTTGCCAGGG
.(((((((..((((.(..(((.&.)))..).))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152750
GeneSymbolCDHR3
Binding site4551,4580
Score0.846
Seed1
Au0.603
Energy-20.4
Binding len22
Me-6.828
Phylopstem0.4028378142857143
Phylopflank0.6058339103749999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure