Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGGAGGCTGAGGCAAGAGAATCGCTTGAACCCAGGAGGCAGA
..(((.(((((((((((((((.&))))))))))............................))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152750
GeneSymbolCDHR3
Binding site4981,5029
Score0.846
Seed0
Au0.426
Energy-23.7
Binding len48
Me-6.858
Phylopstem0.058484720930232575
Phylopflank-0.022010863475000027
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end7
Position3UTR
2D Structure