Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGCCCAGCTGCT
..(((((((.(((.(((.(((&.))).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152750
GeneSymbolCDHR3
Binding site4257,4304
Score1.0
Seed1
Au0.441
Energy-24.3
Binding len20
Me-7.056
Phylopstem-0.5951853285714286
Phylopflank0.004719588125000014
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure