Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGGGCAACGGCGGCTGTC
..((((((((.(((((..(((&)))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152753
GeneSymbolSCUBE3
Binding site811,833
Score0.846
Seed1
Au0.382
Energy-25.2
Binding len22
Me-7.782
Phylopstem5.5117875000000005
Phylopflank5.497339798749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure