Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTAGCCCCAGCTGG
...((((((.((((((((((.&)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152753
GeneSymbolSCUBE3
Binding site4460,4478
Score0.923
Seed0
Au0.441
Energy-22.6
Binding len18
Me-7.757
Phylopstem0.9042919199999998
Phylopflank1.17128319375
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure