Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGTACCGGCGGCTGCGGG
(((((((((((((....((((&)))).....)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152760
GeneSymbolSNX32
Binding site1016,1040
Score0.923
Seed1
Au0.353
Energy-24.4
Binding len24
Me-5.763
Phylopstem1.9996938642857143
Phylopflank3.2599769575
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure