Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCTCAGACCCTGCAAC
(((((((((.((((((.((((&)))))))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152763
GeneSymbolAKNAD1
Binding site2540,2563
Score0.846
Seed1
Au0.471
Energy-19.3
Binding len23
Me-5.18
Phylopstem-0.048547041666666645
Phylopflank-0.1851157575
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure