Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGAATGCAGACTTTGCAGA
(((((((((((.(((((((((&))))))))).)))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152775
GeneSymbolCCDC110
Binding site251,276
Score0.846
Seed1
Au0.559
Energy-20.2
Binding len25
Me-7.284
Phylopstem-0.04010435714285715
Phylopflank0.11442315
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure