Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTAGACAATTGCGGTGAGCCAGTC
.((((((((((.(((.((((((&))))))))).......)).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152778
GeneSymbolMFSD8
Binding site1755,1783
Score0.872
Seed1
Au0.544
Energy-19.8
Binding len28
Me-7.373
Phylopstem-0.5997640909090909
Phylopflank0.238359354
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure