Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTATTCTGCAGCTGCT
..((((((((((..((.((((&))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152778
GeneSymbolMFSD8
Binding site3344,3365
Score1.0
Seed1
Au0.529
Energy-24.0
Binding len21
Me-7.103
Phylopstem4.3245112
Phylopflank2.7672701500000008
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure