Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGGAGGAAGACGCATAATGAACCCTTCCTTGCTGTGAGGCAGG
..(((.(((((((((((((((.&)))))))))))).............................))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152781
GeneSymbolHEATR9
Binding site1265,1314
Score0.846
Seed0
Au0.471
Energy-22.5
Binding len49
Me-6.858
Phylopstem0.9294485795454545
Phylopflank1.2434033649999998
Longest consecutive pairings12
Position of longest consecutive pairings37
Pairings in 3prime end7
PositionCDS
2D Structure