Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCAGCCGCAGAACTGGAC
.(.((((((((((((..((((&))))..)))))))))..))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152784
GeneSymbolCATSPERD
Binding site1973,1996
Score1.0
Seed0
Au0.397
Energy-23.1
Binding len23
Me-5.584
Phylopstem1.734019285714286
Phylopflank-0.09884683250000005
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure