Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCATGTGTCACAGGTTTGTGGAGCCTTCAGCCAGGTG
(((((((((((.((((((....&)))))))))).....................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152785
GeneSymbolGCSAM
Binding site2334,2373
Score0.846
Seed1
Au0.485
Energy-16.8
Binding len39
Me-7.284
Phylopstem-0.32927148125000005
Phylopflank-0.09091499249999999
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end4
Position3UTR
2D Structure