Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTGGCTCAGAGAGGATAATTTGCCTAATGATACATTAAAGTTAGTGG
(((((((((((((((((((...&.))))))))))))........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152785
GeneSymbolGCSAM
Binding site1375,1425
Score0.923
Seed1
Au0.662
Energy-24.3
Binding len45
Me-3.938
Phylopstem0.020402637209302323
Phylopflank-0.11260247249999986
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end5
Position3UTR
2D Structure