Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCAAAGTACAGGCAGACATCCATGACACCCAGGCAGCAGCTGCAGA
((((((((((.(((....(((&.)))..))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152787
GeneSymbolTAB3
Binding site2461,2511
Score0.923
Seed1
Au0.441
Energy-22.4
Binding len21
Me-7.731
Phylopstem0.6314953300000001
Phylopflank0.37186498625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure