Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCTGGGGAAGGAGCTTTTAGGGTTGGGGGGTGG
(((((((((((((((.((((((&))))))..))))))))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152789
GeneSymbolFAM133B
Binding site1306,1343
Score0.923
Seed1
Au0.544
Energy-24.9
Binding len37
Me-4.171
Phylopstem1.2493146035714289
Phylopflank1.5311619927499995
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure