Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCTCTGCCCCAGCAGTCAGCCAGCCGACCGCGCCTGCT
..((((.((((((((...(((&.)))...)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152792
GeneSymbolASPRV1
Binding site8,51
Score0.846
Seed0
Au0.279
Energy-22.5
Binding len21
Me-6.734
Phylopstem2.659625
Phylopflank0.5884874999999998
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure