Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTACAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152795
GeneSymbolHIF3A
Binding site3659,3682
Score0.846
Seed1
Au0.397
Energy-26.9
Binding len23
Me-10.109
Phylopstem0.15874927272727268
Phylopflank-0.43226297999999996
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure