Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCGCTGGGGCTGCAGC
((((((((.((((..((.(((&))).))..)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152795
GeneSymbolHIF3A
Binding site32,54
Score0.923
Seed1
Au0.265
Energy-22.4
Binding len22
Me-6.586
Phylopstem2.16329625
Phylopflank2.2613609371785715
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure