Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCGCATGAAGAGTACACTCACCAGCCGCGGGCGCAC
.(((..((((((((((((((.&)))))))....................)))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152796
GeneSymbolHIF3A
Binding site460,500
Score0.846
Seed0
Au0.353
Energy-22.1
Binding len40
Me-9.813
Phylopstem4.233090205882353
Phylopflank3.3788223962499995
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure