Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCGTGGCCACTGTGTGCCACCCGAATGGCAGCTGCC
..((((((((.(((....(((&.))).....))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152830
GeneSymbolACE
Binding site547,590
Score0.846
Seed1
Au0.382
Energy-21.8
Binding len22
Me-8.75
Phylopstem1.6030435
Phylopflank1.7400225062500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure