Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTGTGCCCCAGACGCACAATGCCCGTGACCAGTGGCTGCAGG
((((((((((((((((((((.&)))))).........................)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152832
GeneSymbolFAM89B
Binding site593,640
Score0.846
Seed1
Au0.382
Energy-23.6
Binding len47
Me-3.938
Phylopstem1.7408857000000006
Phylopflank1.3152908524999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure