Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTAGGGTCTTTGAGTCAGC
..(((((((..(((((((.(((&)))))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152836
GeneSymbolSNX16
Binding site2277,2300
Score0.923
Seed1
Au0.662
Energy-18.8
Binding len23
Me-9.024
Phylopstem4.700534285714285
Phylopflank4.8379000099999985
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure