Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGAGGGGGCTGAGATAGTGA
(((((.(((((((((.(((...&))).))))))..))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152836
GeneSymbolSNX16
Binding site49,71
Score1.0
Seed0
Au0.5
Energy-18.7
Binding len22
Me-6.072
Phylopstem0.996678290909091
Phylopflank0.5673323025000001
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end4
Position5UTR
2D Structure