Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTAGATTTAGTGAGTT
.(((.(((....((((((((((&))))))))))...))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152837
GeneSymbolSNX16
Binding site1829,1850
Score1.0
Seed0
Au0.632
Energy-20.5
Binding len21
Me-16.383
Phylopstem0.37958714
Phylopflank0.8898598462499999
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure