Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTAGGGTCTTTGAGTCAGC
..(((((((..(((((((.(((&)))))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152837
GeneSymbolSNX16
Binding site2190,2213
Score1.0
Seed1
Au0.662
Energy-18.8
Binding len23
Me-9.024
Phylopstem2.6006666
Phylopflank3.1158128650000005
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure